In his 1943 lectures, Schrodinger posed the question 'What Is Life?' and remarked that the inability of chemistry and physics to account for such events is no reason at all for doubting that they could be accounted for by those sciences. 70 years later, that fundamental question still persists.

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image for In his 1943 lectures, Schrodinger posed the question 'What Is Life?' and remarked that the inability of chemistry and physics to account for such events is no reason at all for doubting that they could be accounted for by those sciences. 70 years later, that fundamental question still persists.

Is there a definition for life? The great physicist, Erwin Schrodinger, in his influential 1944 book What is Life? posed this questio...

Is there a definition for life? The great physicist, Erwin Schrodinger, in his influential 1944 book What is Life? posed this question and remarked that “the obvious inability of present-day physics and chemistry to account for such events is no reason at all for doubting that they can be accounted for by those sciences”. But, indeed, can the “events in time and space which take place within the spatial boundary of a living organism be accounted for by physics and chemistry” as Schrodinger so earnestly posed? How do the fundamental laws of physics and chemistry converge to produce biological systems of seemingly ordered complexity?

The notion of order from disorder is not alien to statistical mechanics, where the configuration of the system, whether it be ordered or disordered, is a function of thermal motion. Vast numbers of molecules are averaged to generate macroscopic precision with well-defined states of thermodynamic properties. For instance, the individual constituents of the system possess certain physical properties (i.e. velocity and momentum) and collectively converge to produce macro-structure of behaviours (i.e. density, pressure, and temperature) that are compatible with the statistical behaviour of each constituent particle. A number of different arrangements are possible, each of which is impossible to measure precisely in an experimental setting but which produce average measurable quantities.

According to Schrodinger, however, this is not how biological systems work. The laws of physics that mold solids and gases into ornate complexity are not the same laws of nature that morph biological systems. The order of biological systems seems to be an inherent property rather than a convergent manifestation of statistical approximation. It is a function of laws that generate order from pre-existing order, which in the first place derives from chaos. Schrodinger calculated that the number of atoms that would be present in life’s molecules would be no more than a few million – an amount that is too small for statistical fluctuations to generate the kind of order seen in living organisms, especially with an ever-increasing number of events. Schrodinger had a conceptual idea of genetic information, then only thought of in abstract terms, as being encoded by an aperiodic crystal representing a definitely ordered but a non-repeating arrangement, the stability of which mutates by virtue of quantum jumps. This idea was perhaps the first to associate code with biological determinism.

But, how, from the perspective of nonequilibrium thermodynamics, can such systems embark on an ever-increasing complexity when any process is tendentially bound to a state of maximum entropy. Indeed, as Schrodinger reasoned, all living things absorb energy. Biological systems are energy processing devices, where energy from the sun is used by enzymes to form high-energy bonds in cells. Cellular respiration uses chemical bond energy to do work and give off heat in the process. A continuous flow of energy, thus maintains the system. And, while each living organism perpetually increases its entropy, it “feeds upon negative entropy” from the environment, temporarily preserving order in the process and counteracting heat dispersion.

All living organisms have acquired chemiosmotic systems, manifestable in the omnipresent proton gradient seen in all of life. Indeed, it is the most important source of ATP, the energy currency of life. Living things strip electrons from food, whereby they are transported down an electron transport chain. Energetically favourable and unfavourable reactions are coupled, in the process, to generate energy in the form of ATP. Hundreds of trillion trillion molecules of ATP are released each day, releasing vast amounts of energy. This peculiar mechanism of energy generation seems to be a universal, or rather more puristically, a worldwide feature of all life as we know it. It remains a mystery as to why it is so and as to why it even evolved in the first place.

Schrodinger was convinced that new laws of physics had to be discovered in order to explain the operation of living things and their apparent order from order. But, Schrodinger’s anticipation of an aperiodic crystal encoding hereditary information very presciently predated Watson and Crick’s famous discovery of the structure of DNA. Indeed, it was Schrodinger’s book that inspired Crick, initially a physicist, to move into biophysics and study DNA and that spurred Jim Watson to study genetics as an undergraduate. Watson spoke of his great admiration of Schrodinger’s prophetic vision in his book DNA: The Secret of Life and also remarked:

“Our discovery had put an end to a debate as old as the human species: Does life have some magical, mystical essence, or is it, like any chemical reaction carried out in a science class, the product of normal physical and chemical processes? Is there something divine at the heart of a cell that brings it to life? The double helix answered that question with a definitive No. [….] Life, we now know, is nothing but a vast array of coordinated chemical reactions. The ‘secret’ to that coordination is the breathtakingly complex set of instructions inscribed, again chemically, in our DNA.”

We now know of about 20,000 different protein-encoding genes in a typical mammalian cell. But, quite counter-intuitively, the number of genes does not necessarily correlate with complexity or even intelligence. In fact, we possess less genes than Arabidopsis (25,000 genes) and corn (32,000 genes). Complexity seems to be determined not by the number of genes but rather by the number of different genes.Each gene in humans encodes more proteins than many other species. How, when, and where those different genes are expressed and how they are regulated is a defining factor that determines developmental plans and ensures their diversity. Complexity is also linked the amount of non-coding regions in the genome that do not encode any proteins. 98 % of the human genome is, in fact, non-coding. It is thought that increases in non-coding segments allow for more genetic function with concomitant increases in developmental and regulatory complexity.

Is Schrodinger’s quest to define life possible? Organization, metabolism, growth, reproduction, movement, homeostasis, and evolutionary adaptation seem to be largely ubiquitous across all kingdoms of Life. However, while all living organisms show order, order is also inherent of things that we consider nonliving as well, for instance, crystals and certain rocks. Living organisms grow and reproduce but, in the same light, nonliving entities such as fire can grow and spread over a wide distance. Living organisms utilise energy to function but so do fridges. Living organisms seem to respond to changes in the environment but so do thermostats. But, perhaps the most universal aspect of being alive is the ability of evolutionary adaptation by means of natural selection, the nonrandom selection of randomly varying genetic equipment.

Could evolution explain the emergence of consciousness? What seems to draw the line between innate behavioural patterns of simple organisms and the highly conscious operation of higher animals like humans. Was consciousness merely an emergent consequence of adaptive complexity in order to cope with ever-increasing novel and changing situations? Does consciousness exist or is it some other manifestation of neural networks that we are, hitherto, unaware of.

But, life as we know it is only based on our perception of life as it appears to us on Earth. The properties that we ascribe to living organisms may not be the same properties that living organisms elsewhere in the universe might possess. We only know of one planet where life has evolved and it is our only example of what life could be rather than what life necessarily is. The fact that no clear line exists between what is alive and what is not means that we have to be careful when looking for forms of life elsewhere in the universe, especially ones that are likely to be quite different.

Dubarnik on October 7th, 2017 at 18:14 UTC »

Good article, but Schrodinger's conclusion is still correct: There is no reason for doubting that science will eventually provide the answers. No reason to go supernatural.

missjosiemarie on October 7th, 2017 at 17:34 UTC »

I don’t understand the question

ericwithakay on October 7th, 2017 at 17:34 UTC »

I disagree that the fundamental question still persists. While it's true that biology is vastly more complicated than classical problems in physics, it's also clear that the simple classical laws of physics hold.

Proof :

Take this paper for example :

https://www.ncbi.nlm.nih.gov/pubmed/27872308

What these authors do in this paper is an all atom molecular dynamics simulation. That means every single atom in the system is being simulated. You pick a temperature and at every time point you update the location and velocity of every single atom (constrained by the laws of physics).

If you read the paper you'll see that if you can do this for long enough, you will produce a complicated biological phenomenon, that agrees with what we see in nature.

The problem right now is computational power. The simulation they did here was for very small time scales (nanoseconds) and still probably took weeks on a supercomputer.

We are only constrained by computational power.

Edit: A lot of you are commenting that I'm wrong; That some systems are intractable by simulation due to the fact that the universe has inherent randomness.

I disagree.

Let's use the paper I linked as an example: In this paper the authors do a simulation and observe how a a protein (called a scramblase) helps transport a lipid through a membrane. They find that it does so via a dipole stacking, and membrane bending (details not important).

I 100% agree that there is some inherent randomness in this system. Does that mean we can't simulate it ? No. It simply means that if you run the simulation multiple times, the exact same thing won't happen each time. And that's exactly what the authors report : "Most revealing, we observed two flopping events where a lipid headgroup fully traversed the hydrophilic groove from the cytoplasmic to the extracellular leaflet, and two flipping events where a lipid traversed the groove in the opposite direction. All four events occurred in independent simulations."

As you can see, the same thing did not happen each time. In fact, in at least two of the simulations a lipid went from point A to point B, and in another two the lipid went from point B to point A. Furthermore, they also report that there were simulations where neither happened !

My point is : Just because a system has some randomness, doesn't mean we can't simulate it. Even quantum mechanical systems can be simulated.